Package: oceanmap 0.1.6

oceanmap: A Plotting Toolbox for 2D Oceanographic Data

Plotting toolbox for 2D oceanographic data (satellite data, sea surface temperature, chlorophyll, ocean fronts & bathymetry). Recognized classes and formats include netcdf, Raster, '.nc' and '.gz' files.

Authors:Robert K. Bauer

oceanmap_0.1.6.tar.gz
oceanmap_0.1.6.zip(r-4.5)oceanmap_0.1.6.zip(r-4.4)oceanmap_0.1.6.zip(r-4.3)
oceanmap_0.1.6.tgz(r-4.4-any)oceanmap_0.1.6.tgz(r-4.3-any)
oceanmap_0.1.6.tar.gz(r-4.5-noble)oceanmap_0.1.6.tar.gz(r-4.4-noble)
oceanmap_0.1.6.tgz(r-4.4-emscripten)oceanmap_0.1.6.tgz(r-4.3-emscripten)
oceanmap.pdf |oceanmap.html✨
oceanmap/json (API)

# Install 'oceanmap' in R:

install.packages('oceanmap', repos = c('https://rkbauer.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/rkbauer/r_package_oceanmap/issues

Datasets:

cmap - Color maps
cmap_topo - Color maps
parameter_definitions - Parameter definitions dataframe
region_definitions - Region definitions dataframe
region_definitions_bkp - Region definitions dataframe

On CRAN:

bathymetry chla ggplot mapping-tools ncdf oceanographic-data remote-sensing satellite-im spatial-data sst

45 exports 4 stars 1.72 score 111 dependencies 1 dependents 1 mentions 57 scripts 430 downloads

Last updated 10 months agofrom:c4d3491a2f. Checks:OK: 1 NOTE: 6. Indexed: yes.

Target	Result	Date
Doc / Vignettes	OK	Sep 05 2024
R-4.5-win	NOTE	Sep 05 2024
R-4.5-linux	NOTE	Sep 05 2024
R-4.4-win	NOTE	Sep 05 2024
R-4.4-mac	NOTE	Sep 05 2024
R-4.3-win	NOTE	Sep 05 2024
R-4.3-mac	NOTE	Sep 05 2024

Exports:add.region area_extrac bindate2main bindate2Title bindate2ylab check_gzfiles check_ts clim_plot close_fig cust.colorbar delete.region digits empty.plot extent2SpatialPolygon figure get.avg get.avg.bathy get.bathy get.cb.pos get.gz.info ggplotmap ggplotmaply matrix2raster medm9_proj name_join name_split nc2raster nc2time param_convert param_unconvert plotmap raster2array raster2matrix readbin region2SpatialPolygon regions regions.dim.bathy set.colorbar set.colorbarp SpatialCircle v v.bathy v.gz v.raster writebin

Dependencies:abind askpass base64enc bslib cachem class classInt cli colorspace colourpicker commonmark cpp11 crayon crosstalk curl data.table DBI digest dotCall64 dplyr e1071 evaluate extrafont extrafontdb fansi farver fastmap fields fontawesome fs generics ggedit ggplot2 glue gtable highr htmltools htmlwidgets httpuv httr isoband jquerylib jsonlite KernSmooth knitr labeling later lattice lazyeval lifecycle lubridate magrittr mapdata maps MASS Matrix memoise mgcv mime miniUI munsell ncdf4 nlme openssl pillar pkgconfig plotly plotrix plyr promises proxy purrr R6 rappdirs raster RColorBrewer Rcpp reshape2 rlang rmarkdown rstudioapi Rttf2pt1 s2 sass scales sf shiny shinyAce shinyBS shinyjs sourcetools sp spam stringi stringr sys terra tibble tidyr tidyselect timechange tinytex units utf8 vctrs viridisLite withr wk xfun xtable yaml

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
World Map	.get.worldmap
adding a region to the region_definitions file	add.region
Extracts a pre-defined region from ''.gz''-file and saves subset as a new ''.gz''-file	area_extrac
returns formatted date string for v-plot titles	bindate2main bindate2Title bindate2ylab
Returns summary on ''.gz''-file types	check_gzfiles
checks if daily ''.gz''-file time series is complete	check_ts
plots ''.gz''-file climatologies	clim_plot
function to close current graphic device	close_fig
color maps	cmap cmap_topo
deletes a region from the region_definitions-definition file	delete.region
Creates an empty scatter plot	empty.plot
generate (and save) graphic devices with flexible fileformat selection	figure
returns the average value of circles with specified coordinates and a defined radius	get.avg get.avg.bathy
Returns bathymetric data from the NOAA ETOPO1 database as RasterLayer, given coordinate bounds and resolution.	get.bathy
Converts a ggplot2 object from ggplotmap() to plotly	ggplotmaply
internal datasets	medm9_proj regions.dim.bathy
Converts a matrix to a RasterLayer or arrays to a RasterStack-object	matrix2raster
create '''.gz''-filenames from a list or dataframe	name_join
Returns a summary data frame of ''.gz'' encoded oceanography files by splitting their name	get.gz.info name_split
Convert Raster layer to a matrix or array	nc2raster
reads and converts the time variable of a netcdf-file ('.nc'-file) or 'ncdf4'-object as 'as.Date'-object	nc2time
oceanmap - plot tools for 2D oceanographic data	oceanmap-package oceanmap
converts byte data to absolte values or vise versa ('param_unconvert')	param_convert param_unconvert
parameter definitions dataframe	parameter_definitions
plots landmask of a defined region	ggplotmap plotmap
Convert Raster layer to a matrix or array	raster2array raster2matrix
Returns ''.gz''-file as matrix or raster-object	readbin
region definitions dataframe	region_definitions region_definitions_bkp
Returns two-row summary table of a specified region.	regions
Adds colorbar to an extisting plot device	set.colorbar set.colorbarp
Creates a circle of radius r around a specified point.	SpatialCircle
Plotting spatial data	v v,bathy-method v,character-method v,gz-method v,nc-method v,ncdf4-method v,RasterBrick-method v,RasterLayer-method v,RasterStack-method v.bathy v.gz v.plot v.raster
v-classes	bathy-class gz-class nc-class ncdf4-class
Saves geographic data as byte file (''.gz'')	writebin